Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gm24644-201ENSMUST00000157114 139 ntBASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gm8738-201ENSMUST00000172606 329 ntBASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gm42937-201ENSMUST00000197360 752 ntBASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gm5781-201ENSMUST00000219792 443 ntBASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Hdhd3Q9CYW4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm14928-201ENSMUST00000120198 477 ntBASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm13342-201ENSMUST00000121055 207 ntBASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm5866-201ENSMUST00000177881 973 ntBASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm8494-201ENSMUST00000178171 1233 ntBASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm37131-201ENSMUST00000192502 1561 ntBASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hdhd3Q9CYW4 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC9.61□□□□□ -0.87
Hdhd3Q9CYW4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms