Protein–RNA interactions for Protein: Q9CYI0

Protein Njmu-R1, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CYI0 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q9CYI0 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q9CYI0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q9CYI0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q9CYI0 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q9CYI0 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC13.19□□□□□ -0.3
Q9CYI0 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Q9CYI0 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Q9CYI0 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.19□□□□□ -0.3
Q9CYI0 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Q9CYI0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.19□□□□□ -0.3
Q9CYI0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.18□□□□□ -0.3
Q9CYI0 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.18□□□□□ -0.3
Q9CYI0 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.18□□□□□ -0.3
Q9CYI0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Gm11660-201ENSMUST00000120955 412 ntBASIC13.18□□□□□ -0.3
Q9CYI0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.18□□□□□ -0.3
Q9CYI0 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.18□□□□□ -0.3
Q9CYI0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Gm7467-201ENSMUST00000185173 652 ntBASIC13.18□□□□□ -0.3
Q9CYI0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Gm5705-201ENSMUST00000066241 711 ntBASIC13.18□□□□□ -0.3
Q9CYI0 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.18□□□□□ -0.3
Q9CYI0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.18□□□□□ -0.3
Q9CYI0 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Q9CYI0 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Q9CYI0 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.17□□□□□ -0.3
Q9CYI0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Gm37246-201ENSMUST00000192665 835 ntBASIC13.17□□□□□ -0.3
Q9CYI0 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Q9CYI0 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Q9CYI0 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Q9CYI0 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Q9CYI0 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.17□□□□□ -0.3
Q9CYI0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.17□□□□□ -0.3
Q9CYI0 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Q9CYI0 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Q9CYI0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q9CYI0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC13.16□□□□□ -0.3
Q9CYI0 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q9CYI0 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q9CYI0 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.16□□□□□ -0.3
Q9CYI0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Q9CYI0 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q9CYI0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q9CYI0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Q9CYI0 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q9CYI0 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Q9CYI0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Q9CYI0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms