Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm13392-201ENSMUST00000117708 150 ntBASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm12036-201ENSMUST00000120008 530 ntBASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm5370-201ENSMUST00000187187 574 ntBASIC11.66□□□□□ -0.54
Trim8Q99PJ2 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm37201-201ENSMUST00000191845 523 ntBASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trim8Q99PJ2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Gm27572-201ENSMUST00000183702 255 ntBASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Gm10478-201ENSMUST00000084451 396 ntBASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trim8Q99PJ2 Gm12846-201ENSMUST00000120431 1373 ntBASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.65□□□□□ -0.55
Trim8Q99PJ2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms