Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh15Q99PJ1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm12470-201ENSMUST00000117239 1049 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm18014-201ENSMUST00000183369 817 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm38233-201ENSMUST00000194259 807 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 AC187103.3-201ENSMUST00000225725 646 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm15617-201ENSMUST00000118973 771 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm26313-201ENSMUST00000157770 308 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm17944-201ENSMUST00000186351 643 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm43811-201ENSMUST00000202862 695 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh15Q99PJ1 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm13192-201ENSMUST00000101199 208 ntBASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm14398-201ENSMUST00000117287 1073 ntBASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm10443-201ENSMUST00000119024 210 ntBASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm5808-201ENSMUST00000178090 357 ntBASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm7572-201ENSMUST00000182616 766 ntBASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm20568-201ENSMUST00000197129 208 ntBASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm6794-201ENSMUST00000203829 457 ntBASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh15Q99PJ1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm12745-201ENSMUST00000121767 214 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Mir1941-201ENSMUST00000157834 83 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm16165-201ENSMUST00000160140 795 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Ighv1-70-201ENSMUST00000196509 351 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm42689-201ENSMUST00000202403 404 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdh15Q99PJ1 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms