Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col25a1Q99MQ5 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col25a1Q99MQ5 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col25a1Q99MQ5 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col25a1Q99MQ5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col25a1Q99MQ5 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.38□□□□□ -0.43
Col25a1Q99MQ5 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col25a1Q99MQ5 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col25a1Q99MQ5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm11663-201ENSMUST00000117888 290 ntBASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm27675-201ENSMUST00000184527 94 ntBASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm44814-201ENSMUST00000207018 434 ntBASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col25a1Q99MQ5 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Gm17936-201ENSMUST00000199413 988 ntBASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Gm6641-201ENSMUST00000196100 1315 ntBASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col25a1Q99MQ5 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Col25a1Q99MQ5 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms