Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm23270-201ENSMUST00000104055 131 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm24845-201ENSMUST00000158034 109 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm27046-201ENSMUST00000182160 463 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm3096-201ENSMUST00000185770 364 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm21769-201ENSMUST00000211922 111 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm9996-201ENSMUST00000070359 913 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Chmp1b1Q99LU0 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 AC154517.2-201ENSMUST00000220829 2458 ntBASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Chmp1b1Q99LU0 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Chmp1b1Q99LU0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms