Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Gm5706-201ENSMUST00000181525 993 ntBASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Gm7783-201ENSMUST00000204795 781 ntBASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Gm45598-202ENSMUST00000210719 986 ntBASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Gzmn-202ENSMUST00000225535 989 ntBASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Pcdha8Q91Y12 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gm15610-201ENSMUST00000120584 195 ntBASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Rprl1-202ENSMUST00000198476 238 ntBASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Pcdha8Q91Y12 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.55
Pcdha8Q91Y12 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm7722-201ENSMUST00000120646 741 ntBASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm15276-201ENSMUST00000145953 498 ntBASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm27320-201ENSMUST00000184892 109 ntBASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm44651-201ENSMUST00000207343 372 ntBASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm13097-201ENSMUST00000210722 397 ntBASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Gm19692-201ENSMUST00000203856 2084 ntBASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Pcdha8Q91Y12 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdha8Q91Y12 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pcdha8Q91Y12 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms