Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gm13996-201ENSMUST00000118456 430 ntBASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gm17827-201ENSMUST00000211825 742 ntBASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gm2553-201ENSMUST00000215986 605 ntBASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb1Q91Y08 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm8343-201ENSMUST00000182705 994 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm27627-201ENSMUST00000183644 150 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm29615-201ENSMUST00000185371 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm28224-201ENSMUST00000186078 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm29001-201ENSMUST00000186177 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm28292-201ENSMUST00000186593 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm28101-201ENSMUST00000187608 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm29076-201ENSMUST00000187689 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm28302-201ENSMUST00000187931 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm28646-201ENSMUST00000188220 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm28205-201ENSMUST00000189177 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm29032-201ENSMUST00000189797 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm28695-201ENSMUST00000190300 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm37448-201ENSMUST00000192795 697 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm8913-201ENSMUST00000209491 641 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm4157-201ENSMUST00000211647 679 ntBASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Pcdhb1Q91Y08 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdhb1Q91Y08 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms