Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Ddx41Q91VN6 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm11450-201ENSMUST00000121144 333 ntBASIC13.67□□□□□ -0.22
Ddx41Q91VN6 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm18038-201ENSMUST00000197900 485 ntBASIC13.67□□□□□ -0.22
Ddx41Q91VN6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.67□□□□□ -0.22
Ddx41Q91VN6 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm5455-201ENSMUST00000058710 715 ntBASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ddx41Q91VN6 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm15515-201ENSMUST00000117827 822 ntBASIC13.66□□□□□ -0.22
Ddx41Q91VN6 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm22334-201ENSMUST00000158070 133 ntBASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm5523-201ENSMUST00000180415 997 ntBASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm270-201ENSMUST00000223010 976 ntBASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Spcs1-203ENSMUST00000226374 592 ntBASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ddx41Q91VN6 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ddx41Q91VN6 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 74.8 ms