Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Gm15823-201ENSMUST00000064305 670 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Samd4-206ENSMUST00000137543 6874 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
Tram1Q91V04 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC10.22□□□□□ -0.77
Tram1Q91V04 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tram1Q91V04 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tram1Q91V04 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.21□□□□□ -0.77
Tram1Q91V04 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC10.21□□□□□ -0.77
Tram1Q91V04 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Tram1Q91V04 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.21□□□□□ -0.77
Tram1Q91V04 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.21□□□□□ -0.77
Tram1Q91V04 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.21□□□□□ -0.77
Tram1Q91V04 Gm27701-201ENSMUST00000184498 110 ntBASIC10.21□□□□□ -0.77
Tram1Q91V04 Gm44405-201ENSMUST00000198952 126 ntBASIC10.21□□□□□ -0.77
Tram1Q91V04 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Tram1Q91V04 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Tram1Q91V04 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Tram1Q91V04 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.21□□□□□ -0.78
Tram1Q91V04 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC10.21□□□□□ -0.78
Tram1Q91V04 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Tram1Q91V04 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Tram1Q91V04 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Tram1Q91V04 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.21□□□□□ -0.78
Tram1Q91V04 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.21□□□□□ -0.78
Tram1Q91V04 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.21□□□□□ -0.78
Tram1Q91V04 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Tram1Q91V04 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Tram1Q91V04 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Gm24934-201ENSMUST00000103764 111 ntBASIC10.2□□□□□ -0.78
Tram1Q91V04 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Gm15610-201ENSMUST00000120584 195 ntBASIC10.2□□□□□ -0.78
Tram1Q91V04 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Gm8810-201ENSMUST00000172895 754 ntBASIC10.2□□□□□ -0.78
Tram1Q91V04 Gm8146-201ENSMUST00000192106 1847 ntBASIC10.2□□□□□ -0.78
Tram1Q91V04 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.2□□□□□ -0.78
Tram1Q91V04 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.2□□□□□ -0.78
Tram1Q91V04 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Tram1Q91V04 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Tram1Q91V04 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms