Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.27□□□□□ -0.44
Rprd1aQ8VDS4 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Gm4909-201ENSMUST00000118749 794 ntBASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Rprd1aQ8VDS4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Matn2-203ENSMUST00000226766 3252 ntBASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm23596-201ENSMUST00000104304 132 ntBASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm12036-201ENSMUST00000120008 530 ntBASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm8343-201ENSMUST00000182705 994 ntBASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 AC155637.1-201ENSMUST00000218560 636 ntBASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm807-202ENSMUST00000224929 408 ntBASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm5705-201ENSMUST00000066241 711 ntBASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rprd1aQ8VDS4 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Gm11660-201ENSMUST00000120955 412 ntBASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.25□□□□□ -0.45
Rprd1aQ8VDS4 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms