Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Lin28aQ8K3Y3 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Gm42997-202ENSMUST00000200321 985 ntBASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Gm1821-202ENSMUST00000227415 750 ntBASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Gm10288-201ENSMUST00000084614 537 ntBASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.11□□□□□ -0.63
Lin28aQ8K3Y3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Gm12165-201ENSMUST00000117047 342 ntBASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Gm9062-201ENSMUST00000117712 727 ntBASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 Gm43378-201ENSMUST00000199336 582 ntBASIC11.1□□□□□ -0.63
Lin28aQ8K3Y3 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms