Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rtn1Q8K0T0 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Gm15626-201ENSMUST00000117478 868 ntBASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Gm11660-201ENSMUST00000120955 412 ntBASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Gm2260-201ENSMUST00000184965 657 ntBASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Gm43184-201ENSMUST00000197247 542 ntBASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Gm26226-201ENSMUST00000082509 116 ntBASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.76□□□□□ -0.21
Rtn1Q8K0T0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Gm45657-201ENSMUST00000211318 1349 ntBASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Gm6114-201ENSMUST00000182472 968 ntBASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Gm8343-201ENSMUST00000182705 994 ntBASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Gm18212-201ENSMUST00000211678 889 ntBASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 CT009495.1-201ENSMUST00000224221 862 ntBASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rtn1Q8K0T0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms