Protein–RNA interactions for Protein: Q8CH72

Trim32, E3 ubiquitin-protein ligase TRIM32, mousemouse

Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim32Q8CH72 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Mir669o-201ENSMUST00000103898 96 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm13600-201ENSMUST00000117949 744 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm12990-201ENSMUST00000120372 468 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm12372-201ENSMUST00000121654 768 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm8737-201ENSMUST00000122208 642 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm5277-201ENSMUST00000164923 556 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm44158-201ENSMUST00000203881 505 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm19091-201ENSMUST00000208120 978 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm1000-201ENSMUST00000220520 801 ntTSL 3 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm19189-201ENSMUST00000221689 754 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm272-201ENSMUST00000222073 919 ntBASIC13.5□□□□□ -0.25
Trim32Q8CH72 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trim32Q8CH72 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.49□□□□□ -0.25
Trim32Q8CH72 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.49□□□□□ -0.25
Trim32Q8CH72 Olfr282-203ENSMUST00000213608 1374 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm22711-201ENSMUST00000116890 133 ntBASIC13.49□□□□□ -0.25
Trim32Q8CH72 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm42518-201ENSMUST00000196277 938 ntBASIC13.49□□□□□ -0.25
Trim32Q8CH72 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.49□□□□□ -0.25
Trim32Q8CH72 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.49□□□□□ -0.25
Trim32Q8CH72 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim32Q8CH72 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim32Q8CH72 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms