Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Map1b-203ENSMUST00000223725 2669 ntBASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Vps53Q8CCB4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Gm42937-201ENSMUST00000197360 752 ntBASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 AC141438.2-201ENSMUST00000215068 271 ntBASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.86□□□□□ -0.19
Vps53Q8CCB4 AC135114.1-201ENSMUST00000228682 270 ntBASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Vps53Q8CCB4 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm23699-201ENSMUST00000158835 135 ntBASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm37666-201ENSMUST00000194110 866 ntBASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.85□□□□□ -0.19
Vps53Q8CCB4 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm19187-201ENSMUST00000206781 892 ntBASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Vps53Q8CCB4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Vps53Q8CCB4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms