Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Mir5120-201ENSMUST00000175020 78 ntBASIC11.55□□□□□ -0.56
SynpoQ8CC35 Mir6979-201ENSMUST00000183927 56 ntBASIC11.55□□□□□ -0.56
SynpoQ8CC35 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.55□□□□□ -0.56
SynpoQ8CC35 Gm45224-201ENSMUST00000208203 414 ntBASIC11.55□□□□□ -0.56
SynpoQ8CC35 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.55□□□□□ -0.56
SynpoQ8CC35 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.55□□□□□ -0.56
SynpoQ8CC35 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SynpoQ8CC35 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.54□□□□□ -0.56
SynpoQ8CC35 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.54□□□□□ -0.56
SynpoQ8CC35 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.54□□□□□ -0.56
SynpoQ8CC35 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.54□□□□□ -0.56
SynpoQ8CC35 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Gm18165-201ENSMUST00000217426 928 ntBASIC11.54□□□□□ -0.56
SynpoQ8CC35 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SynpoQ8CC35 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.53□□□□□ -0.56
SynpoQ8CC35 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SynpoQ8CC35 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms