Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.29□□□□□ -0.6
Eri3Q8C460 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Eri3Q8C460 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Eri3Q8C460 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Eri3Q8C460 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.29□□□□□ -0.6
Eri3Q8C460 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Eri3Q8C460 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
Eri3Q8C460 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Eri3Q8C460 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm15711-201ENSMUST00000118889 535 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm15004-201ENSMUST00000119192 630 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm45186-201ENSMUST00000206874 478 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm4157-201ENSMUST00000211647 679 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm5705-201ENSMUST00000066241 711 ntBASIC11.28□□□□□ -0.6
Eri3Q8C460 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Eri3Q8C460 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Eri3Q8C460 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Eri3Q8C460 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.28□□□□□ -0.6
Eri3Q8C460 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Eri3Q8C460 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.27□□□□□ -0.6
Eri3Q8C460 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Eri3Q8C460 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.27□□□□□ -0.6
Eri3Q8C460 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm12380-201ENSMUST00000119012 544 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm14208-201ENSMUST00000119645 678 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm11660-201ENSMUST00000120955 412 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm14441-201ENSMUST00000121960 540 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm2260-201ENSMUST00000184965 657 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm7003-201ENSMUST00000195089 312 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.27□□□□□ -0.61
Eri3Q8C460 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.27□□□□□ -0.61
Eri3Q8C460 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Eri3Q8C460 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms