Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Sh3rf2Q8BZT2 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm12036-201ENSMUST00000120008 530 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm9463-201ENSMUST00000206707 601 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm45550-201ENSMUST00000209380 946 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sh3rf2Q8BZT2 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Gm8737-201ENSMUST00000122208 642 ntBASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Gm23045-201ENSMUST00000175041 96 ntBASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Gm43186-201ENSMUST00000198130 824 ntBASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sh3rf2Q8BZT2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms