Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm28937-201ENSMUST00000185413 695 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm29400-201ENSMUST00000187208 695 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm28662-201ENSMUST00000188446 695 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm28251-201ENSMUST00000188835 695 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm37246-201ENSMUST00000192665 835 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm37318-201ENSMUST00000194325 695 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm38017-201ENSMUST00000194768 695 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm37287-201ENSMUST00000195449 695 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm37793-201ENSMUST00000195548 695 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm5714-201ENSMUST00000197343 566 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Gm6867-201ENSMUST00000219165 425 ntBASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nup54Q8BTS4 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nup54Q8BTS4 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.14□□□□□ -0.47
Nup54Q8BTS4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Mir6979-201ENSMUST00000183927 56 ntBASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nup54Q8BTS4 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Nup54Q8BTS4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms