Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Sfr1Q8BP27 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Gm15236-201ENSMUST00000117309 379 ntBASIC12.18□□□□□ -0.46
Sfr1Q8BP27 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Gm2383-201ENSMUST00000181461 807 ntBASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 AY036118-201ENSMUST00000200021 923 ntBASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Gm43962-201ENSMUST00000203898 190 ntBASIC12.18□□□□□ -0.46
Sfr1Q8BP27 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Mir433-201ENSMUST00000093564 124 ntBASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Sfr1Q8BP27 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm43447-201ENSMUST00000198471 1535 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm22133-201ENSMUST00000102082 109 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm11511-201ENSMUST00000118146 540 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm15610-201ENSMUST00000120584 195 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm18056-201ENSMUST00000207670 568 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm18061-201ENSMUST00000208350 562 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm18063-201ENSMUST00000208529 568 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm18052-201ENSMUST00000208750 559 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm5455-201ENSMUST00000058710 715 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.17□□□□□ -0.46
Sfr1Q8BP27 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms