Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm43463-201ENSMUST00000195967 1803 ntBASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Col16a1Q8BLX7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Gm37782-201ENSMUST00000194879 678 ntBASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Col16a1Q8BLX7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Gng5-ps-201ENSMUST00000120931 205 ntBASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Gm9162-201ENSMUST00000182081 991 ntBASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.3■□□□□ 0.04
Col16a1Q8BLX7 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm23400-201ENSMUST00000174994 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm26463-201ENSMUST00000175065 101 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm24332-201ENSMUST00000175102 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm25959-201ENSMUST00000175112 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm22475-201ENSMUST00000175169 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm22903-201ENSMUST00000175193 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm25070-201ENSMUST00000175237 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm24159-201ENSMUST00000175264 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm25299-201ENSMUST00000175283 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm23798-201ENSMUST00000175560 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm23802-201ENSMUST00000175565 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm25708-201ENSMUST00000177687 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm24370-201ENSMUST00000178007 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm23049-201ENSMUST00000178068 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm28019-201ENSMUST00000178138 101 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm25571-201ENSMUST00000178322 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm25355-201ENSMUST00000178456 101 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm24975-201ENSMUST00000178492 101 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm23189-201ENSMUST00000178954 102 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm25100-201ENSMUST00000179750 101 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm23064-201ENSMUST00000179866 101 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Ighv1-2-201ENSMUST00000195325 378 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Col16a1Q8BLX7 Gm6170-201ENSMUST00000187672 1388 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms