Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.63□□□□□ -0.39
Trim6Q8BGE7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim6Q8BGE7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm14999-201ENSMUST00000121039 624 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm16379-201ENSMUST00000161469 348 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm6222-202ENSMUST00000182143 629 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm36991-201ENSMUST00000191800 648 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm37201-201ENSMUST00000191845 523 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm8762-201ENSMUST00000193486 339 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.62□□□□□ -0.39
Trim6Q8BGE7 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim6Q8BGE7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms