Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC9.77□□□□□ -0.84
Sox21Q811W0 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.77□□□□□ -0.84
Sox21Q811W0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sox21Q811W0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sox21Q811W0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm14058-201ENSMUST00000116082 735 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm6335-201ENSMUST00000118081 1194 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm7816-201ENSMUST00000119884 1194 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm15542-201ENSMUST00000121585 1194 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Rprl1-201ENSMUST00000158050 327 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm9630-201ENSMUST00000178304 885 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm19353-201ENSMUST00000184561 445 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm35960-201ENSMUST00000202712 767 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm17827-201ENSMUST00000211825 742 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm5455-201ENSMUST00000058710 715 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm38376-201ENSMUST00000195493 2253 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm45011-201ENSMUST00000207620 2297 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Sox21Q811W0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox21Q811W0 Gm38273-201ENSMUST00000194987 2382 ntBASIC9.77□□□□□ -0.85
Sox21Q811W0 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm22133-201ENSMUST00000102082 109 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm9062-201ENSMUST00000117712 727 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm10051-201ENSMUST00000145209 414 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.76□□□□□ -0.85
Sox21Q811W0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm9211-201ENSMUST00000182882 975 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm29787-201ENSMUST00000222129 849 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm44831-201ENSMUST00000208469 2989 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.76□□□□□ -0.85
Sox21Q811W0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox21Q811W0 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Sox21Q811W0 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC9.76□□□□□ -0.85
Sox21Q811W0 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms