Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nucks1Q80XU3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm14726-201ENSMUST00000120623 896 ntBASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gm21769-201ENSMUST00000211922 111 ntBASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.67□□□□□ -0.38
Nucks1Q80XU3 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm11700-201ENSMUST00000119409 403 ntBASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm5070-201ENSMUST00000177599 862 ntBASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.66□□□□□ -0.38
Nucks1Q80XU3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms