Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm28937-201ENSMUST00000185413 695 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm29400-201ENSMUST00000187208 695 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm28662-201ENSMUST00000188446 695 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm28251-201ENSMUST00000188835 695 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm37318-201ENSMUST00000194325 695 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm38017-201ENSMUST00000194768 695 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm37287-201ENSMUST00000195449 695 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm37793-201ENSMUST00000195548 695 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm37466-201ENSMUST00000195692 652 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Gm5714-201ENSMUST00000197343 566 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.29□□□□□ -0.44
Trim62Q80V85 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim62Q80V85 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim62Q80V85 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim62Q80V85 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim62Q80V85 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.28□□□□□ -0.44
Trim62Q80V85 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Gm14058-201ENSMUST00000116082 735 ntBASIC12.28□□□□□ -0.44
Trim62Q80V85 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Gm11700-201ENSMUST00000119409 403 ntBASIC12.28□□□□□ -0.44
Trim62Q80V85 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.28□□□□□ -0.44
Trim62Q80V85 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.28□□□□□ -0.44
Trim62Q80V85 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.28□□□□□ -0.44
Trim62Q80V85 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim62Q80V85 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trim62Q80V85 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.27□□□□□ -0.44
Trim62Q80V85 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Trim62Q80V85 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim62Q80V85 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim62Q80V85 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trim62Q80V85 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim62Q80V85 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim62Q80V85 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim62Q80V85 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim62Q80V85 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trim62Q80V85 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trim62Q80V85 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm15515-201ENSMUST00000117827 822 ntBASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.27□□□□□ -0.45
Trim62Q80V85 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms