Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm37793-201ENSMUST00000195548 695 ntBASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Gm18212-201ENSMUST00000211678 889 ntBASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Gm9257-201ENSMUST00000221254 232 ntBASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Gm8385-201ENSMUST00000058999 643 ntBASIC11.87□□□□□ -0.51
Rpp38Q80UU2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.87□□□□□ -0.51
Rpp38Q80UU2 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Rpp38Q80UU2 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gm16505-201ENSMUST00000179981 232 ntBASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.86□□□□□ -0.51
Rpp38Q80UU2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Paupar-201ENSMUST00000194826 3482 ntBASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Rpp38Q80UU2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gm14724-201ENSMUST00000118400 537 ntBASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gm14208-201ENSMUST00000119645 678 ntBASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gm8566-201ENSMUST00000120174 465 ntBASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Mir8093-201ENSMUST00000185043 137 ntBASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gm5982-201ENSMUST00000196234 512 ntBASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Rpp38Q80UU2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms