Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Pcdh19Q80TF3 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm42941-201ENSMUST00000200347 1321 ntBASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm13263-201ENSMUST00000121271 838 ntBASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm22334-201ENSMUST00000158070 133 ntBASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm45575-201ENSMUST00000210283 548 ntBASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Ginm1-202ENSMUST00000065124 300 ntBASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Pcdh19Q80TF3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Gm10774-201ENSMUST00000188689 204 ntBASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 AC154276.3-201ENSMUST00000227643 998 ntBASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC11.68□□□□□ -0.54
Pcdh19Q80TF3 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms