Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.1□□□□□ -0.63
Pif1Q80SX8 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm11511-201ENSMUST00000118146 540 ntBASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm14460-201ENSMUST00000121511 639 ntBASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm28686-201ENSMUST00000187404 609 ntBASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm40332-201ENSMUST00000199847 938 ntBASIC11.1□□□□□ -0.63
Pif1Q80SX8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gm35638-201ENSMUST00000220724 652 ntBASIC11.1□□□□□ -0.63
Pif1Q80SX8 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.1□□□□□ -0.63
Pif1Q80SX8 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Pif1Q80SX8 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm26286-201ENSMUST00000104166 134 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm11509-201ENSMUST00000117358 325 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm13809-201ENSMUST00000117921 597 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm15881-201ENSMUST00000148792 942 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Mir7686-201ENSMUST00000200604 57 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm45219-201ENSMUST00000205602 465 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm18829-201ENSMUST00000188150 1622 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.09□□□□□ -0.63
Pif1Q80SX8 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pif1Q80SX8 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms