Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Gm14752-201ENSMUST00000120719 2075 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.08□□□□□ -0.8
Rif1Q6PR54 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Rif1Q6PR54 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Gm4943-201ENSMUST00000132879 424 ntBASIC10.07□□□□□ -0.8
Rif1Q6PR54 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.07□□□□□ -0.8
Rif1Q6PR54 Gm12407-201ENSMUST00000180219 324 ntBASIC10.07□□□□□ -0.8
Rif1Q6PR54 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC10.07□□□□□ -0.8
Rif1Q6PR54 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Gm20493-201ENSMUST00000173706 213 ntBASIC10.07□□□□□ -0.8
Rif1Q6PR54 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC10.07□□□□□ -0.8
Rif1Q6PR54 Gm26782-203ENSMUST00000227103 751 ntBASIC10.07□□□□□ -0.8
Rif1Q6PR54 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.07□□□□□ -0.8
Rif1Q6PR54 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Rif1Q6PR54 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm15207-201ENSMUST00000119259 442 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm9673-201ENSMUST00000119287 781 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm44891-201ENSMUST00000208817 2223 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm12072-201ENSMUST00000118293 715 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm14052-201ENSMUST00000121434 1031 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.06□□□□□ -0.8
Rif1Q6PR54 Gm25569-201ENSMUST00000157175 131 ntBASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms