Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm23949-201ENSMUST00000104027 127 ntBASIC11.48□□□□□ -0.57
Sdc3Q64519 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm3786-201ENSMUST00000202659 378 ntBASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm44882-201ENSMUST00000205702 802 ntBASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm17827-201ENSMUST00000211825 742 ntBASIC11.48□□□□□ -0.57
Sdc3Q64519 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.48□□□□□ -0.57
Sdc3Q64519 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Sdc3Q64519 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Sdc3Q64519 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.47□□□□□ -0.57
Sdc3Q64519 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC11.47□□□□□ -0.57
Sdc3Q64519 Gm12566-201ENSMUST00000121479 359 ntBASIC11.47□□□□□ -0.57
Sdc3Q64519 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Gm9630-201ENSMUST00000178304 885 ntBASIC11.47□□□□□ -0.57
Sdc3Q64519 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.47□□□□□ -0.57
Sdc3Q64519 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Gm5455-201ENSMUST00000058710 715 ntBASIC11.47□□□□□ -0.57
Sdc3Q64519 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Sdc3Q64519 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Sdc3Q64519 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sdc3Q64519 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.46□□□□□ -0.57
Sdc3Q64519 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Gm22133-201ENSMUST00000102082 109 ntBASIC11.46□□□□□ -0.57
Sdc3Q64519 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Sdc3Q64519 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.46□□□□□ -0.57
Sdc3Q64519 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.46□□□□□ -0.57
Sdc3Q64519 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.46□□□□□ -0.57
Sdc3Q64519 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sdc3Q64519 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Sdc3Q64519 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Sdc3Q64519 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sdc3Q64519 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sdc3Q64519 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Sdc3Q64519 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms