Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Rai1Q61818 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.33□□□□□ -0.6
Rai1Q61818 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Rai1Q61818 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
Rai1Q61818 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Rai1Q61818 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Rai1Q61818 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Gm11619-201ENSMUST00000117474 237 ntBASIC11.33□□□□□ -0.6
Rai1Q61818 Gm12247-201ENSMUST00000117585 670 ntBASIC11.33□□□□□ -0.6
Rai1Q61818 Gm6322-201ENSMUST00000118789 1004 ntBASIC11.33□□□□□ -0.6
Rai1Q61818 Gm15003-201ENSMUST00000118884 446 ntBASIC11.33□□□□□ -0.6
Rai1Q61818 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Gm28833-201ENSMUST00000189671 559 ntBASIC11.33□□□□□ -0.6
Rai1Q61818 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC11.33□□□□□ -0.6
Rai1Q61818 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.33□□□□□ -0.6
Rai1Q61818 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.33□□□□□ -0.6
Rai1Q61818 Gm3433-201ENSMUST00000210149 1058 ntBASIC11.33□□□□□ -0.6
Rai1Q61818 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.33□□□□□ -0.6
Rai1Q61818 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.33□□□□□ -0.6
Rai1Q61818 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.33□□□□□ -0.6
Rai1Q61818 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Rai1Q61818 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Rai1Q61818 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.33□□□□□ -0.6
Rai1Q61818 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Rai1Q61818 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.32□□□□□ -0.6
Rai1Q61818 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.32□□□□□ -0.6
Rai1Q61818 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm14213-201ENSMUST00000119778 768 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm25492-201ENSMUST00000157383 129 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm9135-201ENSMUST00000182963 990 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.32□□□□□ -0.6
Rai1Q61818 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm18204-201ENSMUST00000209835 793 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Gm35713-201ENSMUST00000210516 199 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Rai1Q61818 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm4294-201ENSMUST00000105169 614 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.32□□□□□ -0.6
Rai1Q61818 Gm24248-201ENSMUST00000157321 322 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Gm22379-201ENSMUST00000157480 131 ntBASIC11.32□□□□□ -0.6
Rai1Q61818 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms