Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox17Q61473 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox17Q61473 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.11□□□□□ -0.63
Sox17Q61473 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC11.11□□□□□ -0.63
Sox17Q61473 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Sox17Q61473 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Sox17Q61473 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Sox17Q61473 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox17Q61473 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox17Q61473 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox17Q61473 Araf-201ENSMUST00000001155 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox17Q61473 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox17Q61473 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.1□□□□□ -0.63
Sox17Q61473 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Gm11591-201ENSMUST00000120063 702 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Rprl1-201ENSMUST00000158050 327 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Sox17Q61473 Gm5706-201ENSMUST00000181525 993 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Gm26927-201ENSMUST00000182385 965 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox17Q61473 Gm8515-201ENSMUST00000194852 576 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Gm6745-201ENSMUST00000199216 526 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Gm43002-201ENSMUST00000200310 155 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Gm10254-201ENSMUST00000052888 867 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Sox17Q61473 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.1□□□□□ -0.63
Sox17Q61473 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Sox17Q61473 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.1□□□□□ -0.63
Sox17Q61473 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Sox17Q61473 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Sox17Q61473 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Sox17Q61473 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox17Q61473 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Sox17Q61473 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.09□□□□□ -0.63
Sox17Q61473 Gm7809-201ENSMUST00000153199 742 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.09□□□□□ -0.63
Sox17Q61473 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Sox17Q61473 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Sox17Q61473 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Gm27839-201ENSMUST00000184242 106 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Gm27892-201ENSMUST00000185017 106 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Sox17Q61473 Gm18584-201ENSMUST00000203098 964 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.09□□□□□ -0.63
Sox17Q61473 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms