Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ift88Q61371 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ift88Q61371 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.12□□□□□ -0.31
Ift88Q61371 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ift88Q61371 Gm37931-201ENSMUST00000194686 2866 ntBASIC13.11□□□□□ -0.31
Ift88Q61371 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.11□□□□□ -0.31
Ift88Q61371 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ift88Q61371 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ift88Q61371 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.11□□□□□ -0.31
Ift88Q61371 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ift88Q61371 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ift88Q61371 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.11□□□□□ -0.31
Ift88Q61371 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ift88Q61371 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.11□□□□□ -0.31
Ift88Q61371 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.11□□□□□ -0.31
Ift88Q61371 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ift88Q61371 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ift88Q61371 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ift88Q61371 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ift88Q61371 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Ift88Q61371 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ift88Q61371 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.11□□□□□ -0.31
Ift88Q61371 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
Ift88Q61371 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ift88Q61371 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ift88Q61371 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ift88Q61371 Gm11425-201ENSMUST00000119608 498 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC13.1□□□□□ -0.31
Ift88Q61371 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ift88Q61371 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.1□□□□□ -0.31
Ift88Q61371 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Mir1982-201ENSMUST00000157368 74 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 Snora78-201ENSMUST00000158630 128 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ift88Q61371 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ift88Q61371 Gm38002-201ENSMUST00000193255 180 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.1□□□□□ -0.31
Ift88Q61371 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 AC154222.2-201ENSMUST00000225848 607 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 Morn2-202ENSMUST00000227729 656 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Gm9396-201ENSMUST00000076703 567 ntBASIC13.1□□□□□ -0.31
Ift88Q61371 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC13.1□□□□□ -0.31
Ift88Q61371 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Ift88Q61371 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ift88Q61371 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ift88Q61371 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Ift88Q61371 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.09□□□□□ -0.31
Ift88Q61371 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ift88Q61371 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.09□□□□□ -0.31
Ift88Q61371 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Gm5187-201ENSMUST00000117317 991 ntBASIC13.09□□□□□ -0.31
Ift88Q61371 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.09□□□□□ -0.31
Ift88Q61371 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ift88Q61371 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Ift88Q61371 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Ift88Q61371 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.09□□□□□ -0.31
Ift88Q61371 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 107.9 ms