Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.85□□□□□ -0.19
Prdm1Q60636 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.85□□□□□ -0.19
Prdm1Q60636 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.85□□□□□ -0.19
Prdm1Q60636 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.85□□□□□ -0.19
Prdm1Q60636 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.85□□□□□ -0.19
Prdm1Q60636 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.85□□□□□ -0.19
Prdm1Q60636 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Gm43172-201ENSMUST00000202139 2137 ntBASIC13.85□□□□□ -0.19
Prdm1Q60636 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.85□□□□□ -0.19
Prdm1Q60636 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.85□□□□□ -0.19
Prdm1Q60636 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.85□□□□□ -0.19
Prdm1Q60636 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Prdm1Q60636 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Gm38117-201ENSMUST00000194653 939 ntBASIC13.84□□□□□ -0.19
Prdm1Q60636 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.84□□□□□ -0.19
Prdm1Q60636 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.84□□□□□ -0.19
Prdm1Q60636 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prdm1Q60636 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.83□□□□□ -0.19
Prdm1Q60636 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Prdm1Q60636 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Prdm1Q60636 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Prdm1Q60636 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Prdm1Q60636 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Prdm1Q60636 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prdm1Q60636 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prdm1Q60636 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Prdm1Q60636 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Prdm1Q60636 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prdm1Q60636 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prdm1Q60636 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prdm1Q60636 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prdm1Q60636 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms