Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Trav5d-4Q5R1F6 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm18893-201ENSMUST00000198416 943 ntBASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm43822-201ENSMUST00000200285 476 ntBASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm19187-201ENSMUST00000206781 892 ntBASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC10.21□□□□□ -0.77
Trav5d-4Q5R1F6 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Gm38194-201ENSMUST00000194529 2211 ntBASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
Trav5d-4Q5R1F6 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gm8885-201ENSMUST00000189382 598 ntBASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gm43758-201ENSMUST00000199500 367 ntBASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gm45598-202ENSMUST00000210719 986 ntBASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Trav5d-4Q5R1F6 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms