Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm43858-201ENSMUST00000199418 1778 ntBASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 H2-M10.3-201ENSMUST00000073546 1593 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Piwil1-202ENSMUST00000195959 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Stox2-206ENSMUST00000210030 2734 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Trav3-3Q5R1C3 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm15376-201ENSMUST00000122258 783 ntBASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm15487-201ENSMUST00000122373 465 ntBASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm16342-201ENSMUST00000124025 1025 ntBASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm44397-201ENSMUST00000195950 113 ntBASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm45195-201ENSMUST00000205597 1008 ntBASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 AC098716.1-201ENSMUST00000213527 703 ntBASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm21939-201ENSMUST00000221137 2773 ntBASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trav3-3Q5R1C3 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Ubr1-201ENSMUST00000028728 7768 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Gm3365-201ENSMUST00000216296 1480 ntBASIC8.9□□□□□ -0.98
Trav3-3Q5R1C3 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms