Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Syne3Q4FZC9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Gm14130-201ENSMUST00000118417 987 ntBASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.63□□□□□ -0.39
Syne3Q4FZC9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Rprl1-201ENSMUST00000158050 327 ntBASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Syne3Q4FZC9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Gm25700-201ENSMUST00000177693 110 ntBASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Gm19994-201ENSMUST00000217086 586 ntBASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Gm9257-201ENSMUST00000221254 232 ntBASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Syne3Q4FZC9 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms