Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm25517-201ENSMUST00000083865 134 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Upf3aQ3ULJ3 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 AC174797.2-202ENSMUST00000225729 568 ntBASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Upf3aQ3ULJ3 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Gm24398-201ENSMUST00000157870 109 ntBASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Gm6771-201ENSMUST00000182716 1001 ntBASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Gm5100-201ENSMUST00000195631 589 ntBASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Gm8574-201ENSMUST00000203207 924 ntBASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Gm45594-201ENSMUST00000211717 241 ntBASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.49□□□□□ -0.41
Upf3aQ3ULJ3 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Gm3765-201ENSMUST00000130985 1447 ntBASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Gm25880-201ENSMUST00000104331 132 ntBASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.48□□□□□ -0.41
Upf3aQ3ULJ3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms