Protein–RNA interactions for Protein: Q3U898

Cops9, COP9 signalosome complex subunit 9, mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops9Q3U898 Gm10175-201ENSMUST00000086013 645 ntBASIC8.11□□□□□ -1.11
Cops9Q3U898 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Gm37969-201ENSMUST00000195777 3409 ntBASIC8.11□□□□□ -1.11
Cops9Q3U898 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC8.11□□□□□ -1.11
Cops9Q3U898 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC8.11□□□□□ -1.11
Cops9Q3U898 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC8.11□□□□□ -1.11
Cops9Q3U898 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Prickle2-201ENSMUST00000032093 7754 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Tiam1-201ENSMUST00000002588 7290 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 Ncapd3-202ENSMUST00000086198 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Cops9Q3U898 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC8.11□□□□□ -1.11
Cops9Q3U898 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm6560-201ENSMUST00000198588 1591 ntBASIC8.1□□□□□ -1.11
Cops9Q3U898 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm37931-201ENSMUST00000194686 2866 ntBASIC8.1□□□□□ -1.11
Cops9Q3U898 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Pdgfra-202ENSMUST00000168162 6834 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
Cops9Q3U898 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm22121-201ENSMUST00000175148 54 ntBASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm5706-201ENSMUST00000181525 993 ntBASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm44958-201ENSMUST00000203734 736 ntBASIC8.1□□□□□ -1.11
Cops9Q3U898 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Gm5884-201ENSMUST00000036712 1479 ntBASIC8.1□□□□□ -1.11
Cops9Q3U898 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Olfr914-202ENSMUST00000217057 4948 ntAPPRIS P1 TSL 3 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Cops9Q3U898 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Cops9Q3U898 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Clic5-201ENSMUST00000024755 5870 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Cops9Q3U898 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Plec-202ENSMUST00000054449 15018 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC8.09□□□□□ -1.11
Cops9Q3U898 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Cops9Q3U898 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms