Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr5Q04683 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Cxcr5Q04683 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.28□□□□□ -0.6
Cxcr5Q04683 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Cxcr5Q04683 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.27□□□□□ -0.6
Cxcr5Q04683 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Cxcr5Q04683 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.27□□□□□ -0.61
Cxcr5Q04683 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.27□□□□□ -0.61
Cxcr5Q04683 Gm11531-201ENSMUST00000117614 555 ntBASIC11.27□□□□□ -0.61
Cxcr5Q04683 Gm11439-201ENSMUST00000118598 409 ntBASIC11.27□□□□□ -0.61
Cxcr5Q04683 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.27□□□□□ -0.61
Cxcr5Q04683 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.27□□□□□ -0.61
Cxcr5Q04683 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Cxcr5Q04683 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cxcr5Q04683 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.26□□□□□ -0.61
Cxcr5Q04683 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.26□□□□□ -0.61
Cxcr5Q04683 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.26□□□□□ -0.61
Cxcr5Q04683 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.26□□□□□ -0.61
Cxcr5Q04683 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cxcr5Q04683 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms