Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.97□□□□□ -0.81
Npas1P97459 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Npas1P97459 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC9.97□□□□□ -0.81
Npas1P97459 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Npas1P97459 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Npas1P97459 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC9.97□□□□□ -0.81
Npas1P97459 Gm27701-201ENSMUST00000184498 110 ntBASIC9.97□□□□□ -0.81
Npas1P97459 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC9.97□□□□□ -0.81
Npas1P97459 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.97□□□□□ -0.81
Npas1P97459 AC150560.1-201ENSMUST00000227731 1187 ntBASIC9.97□□□□□ -0.81
Npas1P97459 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Npas1P97459 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Npas1P97459 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Gm44207-201ENSMUST00000204568 1424 ntBASIC9.97□□□□□ -0.81
Npas1P97459 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Npas1P97459 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Npas1P97459 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC9.97□□□□□ -0.81
Npas1P97459 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Npas1P97459 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC9.96□□□□□ -0.81
Npas1P97459 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC9.96□□□□□ -0.81
Npas1P97459 Gm21136-201ENSMUST00000186812 2575 ntBASIC9.96□□□□□ -0.81
Npas1P97459 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.96□□□□□ -0.81
Npas1P97459 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.96□□□□□ -0.81
Npas1P97459 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Npas1P97459 Vmn1r16-203ENSMUST00000228356 3492 ntAPPRIS ALT2 BASIC9.96□□□□□ -0.81
Npas1P97459 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Npas1P97459 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Npas1P97459 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC9.96□□□□□ -0.82
Npas1P97459 Gm12384-201ENSMUST00000119228 919 ntBASIC9.96□□□□□ -0.82
Npas1P97459 Gm11637-201ENSMUST00000120601 592 ntBASIC9.96□□□□□ -0.82
Npas1P97459 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.96□□□□□ -0.82
Npas1P97459 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.96□□□□□ -0.82
Npas1P97459 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Gm27331-201ENSMUST00000183705 60 ntBASIC9.96□□□□□ -0.82
Npas1P97459 Gm27243-201ENSMUST00000183964 521 ntBASIC9.96□□□□□ -0.82
Npas1P97459 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC9.96□□□□□ -0.82
Npas1P97459 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.96□□□□□ -0.82
Npas1P97459 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.82
Npas1P97459 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC9.96□□□□□ -0.82
Npas1P97459 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Npas1P97459 Gm5884-201ENSMUST00000036712 1479 ntBASIC9.96□□□□□ -0.82
Npas1P97459 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Npas1P97459 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC9.96□□□□□ -0.82
Npas1P97459 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms