Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim43cP86449 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim43cP86449 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.91□□□□□ -0.34
Trim43cP86449 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.91□□□□□ -0.34
Trim43cP86449 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trim43cP86449 Gm3332-201ENSMUST00000189337 928 ntBASIC12.91□□□□□ -0.34
Trim43cP86449 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trim43cP86449 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.91□□□□□ -0.34
Trim43cP86449 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trim43cP86449 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.91□□□□□ -0.34
Trim43cP86449 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trim43cP86449 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim43cP86449 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Trim43cP86449 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.9□□□□□ -0.34
Trim43cP86449 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim43cP86449 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim43cP86449 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.9□□□□□ -0.34
Trim43cP86449 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim43cP86449 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
Trim43cP86449 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Gm16505-201ENSMUST00000179981 232 ntBASIC12.9□□□□□ -0.34
Trim43cP86449 Gm27627-201ENSMUST00000183644 150 ntBASIC12.9□□□□□ -0.34
Trim43cP86449 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim43cP86449 Gm18038-201ENSMUST00000197900 485 ntBASIC12.9□□□□□ -0.34
Trim43cP86449 Gm6450-201ENSMUST00000200896 574 ntBASIC12.9□□□□□ -0.34
Trim43cP86449 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.9□□□□□ -0.34
Trim43cP86449 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43cP86449 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.9□□□□□ -0.34
Trim43cP86449 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Trim43cP86449 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Trim43cP86449 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trim43cP86449 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Trim43cP86449 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trim43cP86449 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Gm23596-201ENSMUST00000104304 132 ntBASIC12.89□□□□□ -0.35
Trim43cP86449 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim43cP86449 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Trim43cP86449 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.89□□□□□ -0.35
Trim43cP86449 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim43cP86449 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.89□□□□□ -0.35
Trim43cP86449 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.89□□□□□ -0.35
Trim43cP86449 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.89□□□□□ -0.35
Trim43cP86449 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.89□□□□□ -0.35
Trim43cP86449 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Trim43cP86449 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trim43cP86449 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms