Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CiitaP79621 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CiitaP79621 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CiitaP79621 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.86□□□□□ -0.35
CiitaP79621 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.86□□□□□ -0.35
CiitaP79621 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Paupar-201ENSMUST00000194826 3482 ntBASIC12.86□□□□□ -0.35
CiitaP79621 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CiitaP79621 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Gm22920-201ENSMUST00000102175 109 ntBASIC12.86□□□□□ -0.35
CiitaP79621 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Gm11783-201ENSMUST00000119549 885 ntBASIC12.86□□□□□ -0.35
CiitaP79621 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.86□□□□□ -0.35
CiitaP79621 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CiitaP79621 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CiitaP79621 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.86□□□□□ -0.35
CiitaP79621 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.86□□□□□ -0.35
CiitaP79621 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CiitaP79621 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.86□□□□□ -0.35
CiitaP79621 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CiitaP79621 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CiitaP79621 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CiitaP79621 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.85□□□□□ -0.35
CiitaP79621 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC12.85□□□□□ -0.35
CiitaP79621 Gm12616-201ENSMUST00000118594 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm15352-201ENSMUST00000118696 270 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.85□□□□□ -0.35
CiitaP79621 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Gm24844-201ENSMUST00000158679 127 ntBASIC12.85□□□□□ -0.35
CiitaP79621 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.85□□□□□ -0.35
CiitaP79621 Gm24514-201ENSMUST00000174961 285 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm12624-201ENSMUST00000177615 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm12621-201ENSMUST00000177760 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm12615-201ENSMUST00000177970 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm12622-201ENSMUST00000177975 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm12627-201ENSMUST00000178412 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm12625-201ENSMUST00000179122 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm12614-201ENSMUST00000179586 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm12613-201ENSMUST00000180323 382 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Gm38151-201ENSMUST00000195085 289 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm5982-201ENSMUST00000196234 512 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CiitaP79621 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CiitaP79621 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
CiitaP79621 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CiitaP79621 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CiitaP79621 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.85□□□□□ -0.35
CiitaP79621 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.85□□□□□ -0.35
CiitaP79621 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.84□□□□□ -0.35
CiitaP79621 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CiitaP79621 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CiitaP79621 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 767.7 ms