Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.93□□□□□ -0.82
Pdlim4P70271 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.93□□□□□ -0.82
Pdlim4P70271 Gm9257-201ENSMUST00000221254 232 ntBASIC9.93□□□□□ -0.82
Pdlim4P70271 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Pdlim4P70271 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Pdlim4P70271 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Pdlim4P70271 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Pdlim4P70271 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Pdlim4P70271 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Pdlim4P70271 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC9.92□□□□□ -0.82
Pdlim4P70271 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.92□□□□□ -0.82
Pdlim4P70271 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.92□□□□□ -0.82
Pdlim4P70271 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Gm9176-201ENSMUST00000219955 1120 ntBASIC9.92□□□□□ -0.82
Pdlim4P70271 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Pdlim4P70271 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Pdlim4P70271 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC9.91□□□□□ -0.82
Pdlim4P70271 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.91□□□□□ -0.82
Pdlim4P70271 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Pdlim4P70271 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC9.91□□□□□ -0.82
Pdlim4P70271 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Pdlim4P70271 Gm15808-201ENSMUST00000119046 604 ntBASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms