Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Mir877-201ENSMUST00000104738 85 ntBASIC11.13□□□□□ -0.63
Six5P70178 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.13□□□□□ -0.63
Six5P70178 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.13□□□□□ -0.63
Six5P70178 Gm9192-201ENSMUST00000183221 985 ntBASIC11.13□□□□□ -0.63
Six5P70178 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.13□□□□□ -0.63
Six5P70178 Gm18038-201ENSMUST00000197900 485 ntBASIC11.13□□□□□ -0.63
Six5P70178 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.13□□□□□ -0.63
Six5P70178 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Six5P70178 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Six5P70178 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.13□□□□□ -0.63
Six5P70178 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Six5P70178 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Six5P70178 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Six5P70178 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.12□□□□□ -0.63
Six5P70178 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.12□□□□□ -0.63
Six5P70178 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.12□□□□□ -0.63
Six5P70178 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.12□□□□□ -0.63
Six5P70178 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.12□□□□□ -0.63
Six5P70178 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Six5P70178 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.12□□□□□ -0.63
Six5P70178 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Six5P70178 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.12□□□□□ -0.63
Six5P70178 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Six5P70178 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Gm37666-201ENSMUST00000194110 866 ntBASIC11.12□□□□□ -0.63
Six5P70178 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Gm270-201ENSMUST00000223010 976 ntBASIC11.12□□□□□ -0.63
Six5P70178 AC121960.1-201ENSMUST00000227982 564 ntBASIC11.12□□□□□ -0.63
Six5P70178 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Six5P70178 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.12□□□□□ -0.63
Six5P70178 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Six5P70178 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Six5P70178 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Six5P70178 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.11□□□□□ -0.63
Six5P70178 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Six5P70178 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms