Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.5□□□□□ -0.73
Sec61a1P61620 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Sec61a1P61620 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Sec61a1P61620 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC10.49□□□□□ -0.73
Sec61a1P61620 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC10.49□□□□□ -0.73
Sec61a1P61620 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Gm10434-201ENSMUST00000101158 471 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Gm13875-201ENSMUST00000120162 282 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 Gm9257-201ENSMUST00000221254 232 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Sec61a1P61620 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC10.49□□□□□ -0.73
Sec61a1P61620 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sec61a1P61620 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Sec61a1P61620 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Sec61a1P61620 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Gm13492-201ENSMUST00000119772 665 ntBASIC10.48□□□□□ -0.73
Sec61a1P61620 Gm15703-201ENSMUST00000120250 880 ntBASIC10.48□□□□□ -0.73
Sec61a1P61620 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Gm37259-201ENSMUST00000193903 849 ntBASIC10.48□□□□□ -0.73
Sec61a1P61620 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.48□□□□□ -0.73
Sec61a1P61620 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.48□□□□□ -0.73
Sec61a1P61620 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sec61a1P61620 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sec61a1P61620 Rassf8-202ENSMUST00000058538 1131 ntBASIC10.48□□□□□ -0.73
Sec61a1P61620 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms