Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LtbrP50284 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.1□□□□□ -0.15
LtbrP50284 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Mir671-201ENSMUST00000102432 98 ntBASIC14.1□□□□□ -0.15
LtbrP50284 Gm24541-201ENSMUST00000103871 96 ntBASIC14.1□□□□□ -0.15
LtbrP50284 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC14.1□□□□□ -0.15
LtbrP50284 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LtbrP50284 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
LtbrP50284 Gm8531-201ENSMUST00000188319 893 ntBASIC14.1□□□□□ -0.15
LtbrP50284 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC14.1□□□□□ -0.15
LtbrP50284 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.1□□□□□ -0.15
LtbrP50284 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.1□□□□□ -0.15
LtbrP50284 Gm45594-201ENSMUST00000211717 241 ntBASIC14.1□□□□□ -0.15
LtbrP50284 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.1□□□□□ -0.15
LtbrP50284 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
LtbrP50284 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LtbrP50284 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.1□□□□□ -0.15
LtbrP50284 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
LtbrP50284 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.1□□□□□ -0.15
LtbrP50284 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
LtbrP50284 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
LtbrP50284 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
LtbrP50284 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.09□□□□□ -0.15
LtbrP50284 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC14.09□□□□□ -0.15
LtbrP50284 Gm23757-201ENSMUST00000158353 100 ntBASIC14.09□□□□□ -0.15
LtbrP50284 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.09□□□□□ -0.15
LtbrP50284 Gm43906-201ENSMUST00000203194 906 ntBASIC14.09□□□□□ -0.15
LtbrP50284 Gm44124-201ENSMUST00000204159 472 ntBASIC14.09□□□□□ -0.15
LtbrP50284 AC154257.1-202ENSMUST00000224729 843 ntBASIC14.09□□□□□ -0.15
LtbrP50284 AC154848.1-201ENSMUST00000225451 846 ntBASIC14.09□□□□□ -0.15
LtbrP50284 CT025525.1-201ENSMUST00000226325 1054 ntBASIC14.09□□□□□ -0.15
LtbrP50284 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
LtbrP50284 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
LtbrP50284 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LtbrP50284 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LtbrP50284 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
LtbrP50284 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LtbrP50284 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LtbrP50284 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LtbrP50284 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
LtbrP50284 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
LtbrP50284 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Gm44286-201ENSMUST00000204098 1487 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
LtbrP50284 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.08□□□□□ -0.16
LtbrP50284 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 n-R5s64-201ENSMUST00000102019 119 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Gm25063-201ENSMUST00000104666 94 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Gm15566-201ENSMUST00000121130 590 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Gm12783-201ENSMUST00000121425 397 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC14.08□□□□□ -0.16
LtbrP50284 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC14.08□□□□□ -0.16
LtbrP50284 Ighv2-1-201ENSMUST00000170946 353 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Gm29410-201ENSMUST00000188383 694 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Gm9116-201ENSMUST00000192400 1018 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Gm42629-201ENSMUST00000199063 1102 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Gm7959-201ENSMUST00000221823 1078 ntBASIC14.08□□□□□ -0.16
LtbrP50284 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.08□□□□□ -0.16
LtbrP50284 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
LtbrP50284 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms