Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.12□□□□□ -0.31
Brca1P48754 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Brca1P48754 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Brca1P48754 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.12□□□□□ -0.31
Brca1P48754 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.11□□□□□ -0.31
Brca1P48754 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Brca1P48754 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gm13284-201ENSMUST00000121020 547 ntBASIC13.11□□□□□ -0.31
Brca1P48754 Gm3828-201ENSMUST00000121817 257 ntBASIC13.11□□□□□ -0.31
Brca1P48754 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC13.11□□□□□ -0.31
Brca1P48754 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.11□□□□□ -0.31
Brca1P48754 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Brca1P48754 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Brca1P48754 Gm12337-201ENSMUST00000119634 400 ntBASIC13.11□□□□□ -0.31
Brca1P48754 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.11□□□□□ -0.31
Brca1P48754 Gm35960-201ENSMUST00000202712 767 ntBASIC13.11□□□□□ -0.31
Brca1P48754 Gm45310-201ENSMUST00000210436 275 ntBASIC13.11□□□□□ -0.31
Brca1P48754 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC13.11□□□□□ -0.31
Brca1P48754 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Brca1P48754 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Brca1P48754 Gm43773-201ENSMUST00000198548 2162 ntBASIC13.11□□□□□ -0.31
Brca1P48754 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.11□□□□□ -0.31
Brca1P48754 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Brca1P48754 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Brca1P48754 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Brca1P48754 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.1□□□□□ -0.31
Brca1P48754 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Brca1P48754 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Brca1P48754 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Brca1P48754 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Brca1P48754 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Brca1P48754 Gm16219-201ENSMUST00000120096 274 ntBASIC13.1□□□□□ -0.31
Brca1P48754 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.1□□□□□ -0.31
Brca1P48754 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Brca1P48754 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.1□□□□□ -0.31
Brca1P48754 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC13.1□□□□□ -0.31
Brca1P48754 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.1□□□□□ -0.31
Brca1P48754 Capsl-202ENSMUST00000226688 739 ntBASIC13.1□□□□□ -0.31
Brca1P48754 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.1□□□□□ -0.31
Brca1P48754 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Brca1P48754 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 105.6 ms