Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm42657-201ENSMUST00000201746 211 ntBASIC11.63□□□□□ -0.55
Sox18P43680 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Gm44237-201ENSMUST00000205183 936 ntBASIC11.63□□□□□ -0.55
Sox18P43680 Gm35713-201ENSMUST00000210516 199 ntBASIC11.63□□□□□ -0.55
Sox18P43680 Mt1-202ENSMUST00000211807 1085 ntBASIC11.63□□□□□ -0.55
Sox18P43680 Gm4803-201ENSMUST00000218729 1279 ntBASIC11.63□□□□□ -0.55
Sox18P43680 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.63□□□□□ -0.55
Sox18P43680 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sox18P43680 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.63□□□□□ -0.55
Sox18P43680 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Sox18P43680 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.63□□□□□ -0.55
Sox18P43680 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Sox18P43680 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Sox18P43680 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.62□□□□□ -0.55
Sox18P43680 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.62□□□□□ -0.55
Sox18P43680 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Gm11949-201ENSMUST00000117640 372 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Gm15352-201ENSMUST00000118696 270 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Gm15595-201ENSMUST00000120840 961 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Gm6027-201ENSMUST00000121467 756 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.62□□□□□ -0.55
Sox18P43680 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Gm20778-201ENSMUST00000178524 627 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Gm44061-201ENSMUST00000203962 1195 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Gm45856-201ENSMUST00000212752 416 ntBASIC11.62□□□□□ -0.55
Sox18P43680 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Gm3318-201ENSMUST00000217604 1183 ntBASIC11.62□□□□□ -0.55
Sox18P43680 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC11.62□□□□□ -0.55
Sox18P43680 AC116589.4-201ENSMUST00000222390 216 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.62□□□□□ -0.55
Sox18P43680 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Sox18P43680 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Sox18P43680 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Gm45114-201ENSMUST00000208280 1349 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sox18P43680 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Gm24934-201ENSMUST00000103764 111 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Gm11509-201ENSMUST00000117358 325 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Gm15719-201ENSMUST00000120619 635 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sox18P43680 Gm10731-201ENSMUST00000181171 448 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Mir8115-201ENSMUST00000184992 119 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Gm8480-201ENSMUST00000190350 698 ntBASIC11.61□□□□□ -0.55
Sox18P43680 Gm42433-201ENSMUST00000196806 940 ntBASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms