Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.88□□□□□ -0.67
Nkx2-2P42586 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Gm38117-201ENSMUST00000194653 939 ntBASIC10.88□□□□□ -0.67
Nkx2-2P42586 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 AC107638.1-201ENSMUST00000213690 1061 ntBASIC10.88□□□□□ -0.67
Nkx2-2P42586 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Gm807-202ENSMUST00000224929 408 ntBASIC10.88□□□□□ -0.67
Nkx2-2P42586 Gm8385-201ENSMUST00000058999 643 ntBASIC10.88□□□□□ -0.67
Nkx2-2P42586 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx2-2P42586 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm23596-201ENSMUST00000104304 132 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm12857-201ENSMUST00000117678 592 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Cd63-ps-202ENSMUST00000154992 717 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm28937-201ENSMUST00000185413 695 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm29400-201ENSMUST00000187208 695 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm28662-201ENSMUST00000188446 695 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm28251-201ENSMUST00000188835 695 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm3332-201ENSMUST00000189337 928 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm37318-201ENSMUST00000194325 695 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm38017-201ENSMUST00000194768 695 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm37287-201ENSMUST00000195449 695 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm37793-201ENSMUST00000195548 695 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.87□□□□□ -0.67
Nkx2-2P42586 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Nkx2-2P42586 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms